rfaRm - An R interface to the Rfam database
rfaRm provides a client interface to the Rfam database of RNA families. Data that can be retrieved include RNA families, secondary structure images, covariance models, sequences within each family, alignments leading to the identification of a family and secondary structures in the dot-bracket format.
Last updated 4 months ago
functionalgenomicsdataimportthirdpartyclientvisualizationmultiplesequencealignment
0.91 score 38 dependenciesncRNAtools - An R toolkit for non-coding RNA
ncRNAtools provides a set of basic tools for handling and analyzing non-coding RNAs. These include tools to access the RNAcentral database and to predict and visualize the secondary structure of non-coding RNAs. The package also provides tools to read, write and interconvert the file formats most commonly used for representing such secondary structures.
Last updated 4 months ago
functionalgenomicsdataimportthirdpartyclientvisualizationstructuralprediction
1 stars 0.23 score 45 dependencies